[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 56 items for (author: hwang & sh)

EMDB-40603:
GPR161 Gs heterotrimer
Method: single particle / : Hoppe N, Manglik A, Harrison S

PDB-8smv:
GPR161 Gs heterotrimer
Method: single particle / : Hoppe N, Manglik A, Harrison S

EMDB-35904:
AtSLAC1 8D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-35920:
AtSLAC1 in open state
Method: single particle / : Lee Y, Lee S

EMDB-34303:
AtSLAC1 6D mutant in closed state
Method: single particle / : Lee Y, Lee S

EMDB-34304:
AtSLAC1 6D mutant in open state
Method: single particle / : Lee Y, Lee S

EMDB-29013:
96nm doublet microtubule repeat from wild type mouse sperm
Method: subtomogram averaging / : Hwang JY, Chai P, Nawaz S

EMDB-28606:
96nm doublet microtubule repeat from LRRC23-KO mouse sperm
Method: subtomogram averaging / : Hwang JY, Chai P, Nawaz S

EMDB-34087:
The cargo delivery vehicle Hcp-VgrG-PAAR of the Type VI secretion system
Method: single particle / : He W, Wu K, Zhu L, Wen Y

PDB-8gra:
Structure of Type VI secretion system cargo delivery vehicle Hcp-VgrG-PAAR
Method: single particle / : Wen Y, He W, Zhu L

EMDB-33734:
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
Method: single particle / : Yoo Y, Cho HS

EMDB-25427:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2
Method: single particle / : Wright KM, Gabelli SB

PDB-7stf:
Structure of KRAS G12V/HLA-A*03:01 in complex with antibody fragment V2
Method: single particle / : Wright KM, Gabelli SB, Miller M

EMDB-26989:
Extracellular architecture of an engineered canonical Wnt signaling ternary complex
Method: single particle / : Tsutsumi N, Jude KM, Garcia KC

PDB-8ctg:
Extracellular architecture of an engineered canonical Wnt signaling ternary complex
Method: single particle / : Tsutsumi N, Jude KM, Garcia KC

EMDB-29073:
Human IFT-A complex structures provide molecular insights into ciliary transport
Method: single particle / : Jiang M, Palicharla VR, Miller D, Hwang SH, Zhu H, Hixson P, Mukhopadhyay S, Sun J

EMDB-29078:
Human IFT-A complex structures provide molecular insights into ciliary transport
Method: single particle / : Jiang M, Palicharla VR, Miller D, Hwang SH, Zhu H, Hixson P, Mukhopadhyay S, Sun J

EMDB-25606:
Zika Virus particle bound with IgM antibody DH1017 Fab fragment
Method: single particle / : Miller AS, Kuhn RJ

PDB-7t17:
Zika Virus asymmetric unit bound with IgM antibody DH1017 Fab fragment
Method: single particle / : Miller AS, Kuhn RJ

EMDB-33466:
Cryo-EM structure of HK022 putRNA-associated E.coli RNA polymerase elongation complex
Method: single particle / : Hwang SH, Kang JY

EMDB-24210:
The 3D structure and in situ arrangements of CatSper channel from the cryo-electron tomography and subtomographic average of mouse wild type sperm flagella
Method: subtomogram averaging / : Zhao Y, Wang H, Wiesehoefer C, Shah NB, Reetz E, Hwang J, Huang X, Lishko PV, Davies KM, Wennemuth G, Nicastro D, Chung JJ

EMDB-26206:
The 3D structure and in situ arrangements (Forward slash) of CatSper channel from the cryo-electron tomography and subtomographic average of mouse efcab9 mutant sperm flagella
Method: subtomogram averaging / : Zhao Y, Wang H, Wiesehoefer C, Shah NB, Reetz E, Hwang J, Huang X, Lishko PV, Davies KM, Wennemuth G, Nicastro D, Chung JJ

EMDB-26207:
The 3D structure and in situ arrangements (Backslash) of CatSper channel from the cryo-electron tomography and subtomographic average of mouse efcab9 mutant sperm flagella
Method: subtomogram averaging / : Zhao Y, Wang H, Wiesehoefer C, Shah NB, Reetz E, Hwang J, Huang X, Lishko PV, Davies KM, Wennemuth G, Nicastro D, Chung JJ

EMDB-30673:
Activity optimized supercomplex state1
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30674:
Activity optimized supercomplex state2
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30675:
Activity optimized supercomplex state3
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30676:
Activity optimized complex I (closed form)
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30677:
Activity optimized complex I (open form)
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-30706:
Activity optimized supercomplex state4
Method: single particle / : Jeon TJ, Lee SG, Yoo SH, Ryu JH, Kim DS, Hyun JK, Kim HM, Ryu SE

EMDB-31470:
Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody chAb-25 (Focused refinement of S-RBD and chAb-25 region)
Method: single particle / : Yang TJ, Yu PY, Wu HC, Hsu STD

EMDB-31471:
Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody chAb-45 (Focused refinement of S-RBD and chAb-45 region)
Method: single particle / : Yang TJ, Yu PY, Wu HC, Hsu STD

PDB-7f62:
Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody chAb-25 (Focused refinement of S-RBD and chAb-25 region)
Method: single particle / : Yang TJ, Yu PY, Wu HC, Hsu STD

PDB-7f63:
Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody chAb-45 (Focused refinement of S-RBD and chAb-45 region)
Method: single particle / : Yang TJ, Yu PY, Wu HC, Hsu STD

EMDB-30929:
The negatively stained reconstruction of cytoplasmic AdeS in APO state
Method: single particle / : Zhu L, Wu D, Wu K

EMDB-30930:
The negatively stained reconstruction of cytoplasmic AdeS in ATP-bound state
Method: single particle / : Zhu L, Wu D, Wu K

EMDB-12303:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Method: single particle / : Jomaa A, Lee JH, Shan S, Ban N

EMDB-12304:
SRP54 and SRP RNA proximal site
Method: single particle / : Jomaa A, Ban N

EMDB-12305:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in the early state B
Method: single particle / : Jomaa A, Lee JH, Shan S, Ban N

PDB-7nfx:
Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Method: single particle / : Jomaa A, Lee JH, Shan S, Ban N

EMDB-23156:
SARS-CoV 2 Spike Protein bound to LY-CoV555
Method: single particle / : Goldsmith JA, McLellan JS

PDB-7l3n:
SARS-CoV 2 Spike Protein bound to LY-CoV555
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-22295:
Cryo-EM structure of SHIV-elicited RHA1.V2.01 in complex with HIV-1 Env BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

PDB-6xrt:
Cryo-EM structure of SHIV-elicited RHA1.V2.01 in complex with HIV-1 Env BG505 DS-SOSIP.664
Method: single particle / : Gorman J, Kwong PD

EMDB-11002:
CryoEM structure of bovine cytochrome bc1 in complex with a tetrahydroquinolone inhibitor
Method: single particle / : Muench SP, Johnson R, Amporndanai K, Atonyuk S

EMDB-3779:
Cryo-electron tomography averaged map of microtubule doublet from p23 mutant Chlamydomonas axoneme
Method: subtomogram averaging / : Sale WS, Ishikawa T, Yamamoto R, Obbineni JM, Alford LM, Hwang J, Ide T, Owa M, Kon T, Inaba K, Noliyanda J, King SM, Dutcher S

EMDB-3786:
Cryo-electron tomography averaged map of microtubule doublet from p23 mutant Chlamydomonas axoneme
Method: subtomogram averaging / : Sale WS, Ishikawa T, Yamamoto R, Obbineni JM, Alford LM, Hwang J, Ide T, Owa M, Kon T, Inaba K, Noliyanda J, King SM, Dutcher S

EMDB-3787:
Cryo-electron tomography averaged map of microtubule doublet from p23 mutant Chlamydomonas axoneme
Method: subtomogram averaging / : Sale WS, Ishikawa T, Yamamoto R, Obbineni JM, Alford LM, Hwang J, Ide T, Owa M, Kon T, Inaba K, Noliyanda J, King SM, Dutcher S

PDB-5nco:
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
Method: single particle / : Jomaa A, Hwang Fu Y, Boerhinger D, Leibundgut M, Shan SO, Ban N

EMDB-8507:
92BR SOSIP.664 trimer in complex with DH270.1 Fab
Method: single particle / : Fera D, Harrison SC

EMDB-8078:
BG505 SOSIP.664 HIV-1 Env trimer in complex with anti-HIV CH235.12 wk323 Fab
Method: single particle / : Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more